BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030A01SP1|AL429139
(812 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 1571 0.0
>3x_Contig1806
Length = 53694
Score = 1571 bits (791), Expect = 0.0
Identities = 808/814 (99%), Gaps = 2/814 (0%)
Strand = Plus / Minus
Query: 1 acacccatacagaagagagtgtacaaaacgtcttgataagcatgaattgcggcaagtctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29861 acacccatacagaagagagtgtacaaaacgtcttgataagcatgaattgcggcaagtctt 29802
Query: 61 gttggagtaccccatggttgggcagtgatatctgccaaatcctcaaaagcggcagctgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29801 gttggagtaccccatggttgggcagtgatatctgccaaatcctcaaaagcggcagctgca 29742
Query: 121 gatgcctcatcaggaatatatttgtacaatgcttttggtaagtgatcagtccaaacagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29741 gatgcctcatcaggaatatatttgtacaatgcttttggtaagtgatcagtccaaacagca 29682
Query: 181 gaggtgatggcgga--ccactgcggcaccgatggaactgtatagtgataacacagagatt 238
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29681 gaggtgatggcggagcccactgcggcaccgatggaactgtatagtgataacacagagatt 29622
Query: 239 gtagcagccatgtcttgatgtggaactgcagcttgtgcggccacctgtgtgcccataaca 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29621 gtagcagccatgtcttgatgtggaactgcagcttgtgcggccacctgtgtgcccataaca 29562
Query: 299 ttagcggcatcaccaaaacatgtwataataagtgcagcaacgacgagacctaaatgtgga 358
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 29561 ttagcggcatcaccaaaacatgtaataataagtgcagcaacgacgagacctaaatgtgga 29502
Query: 359 ccatcttccttcgtagaacacaacacatatagacccataccaatcaatttaatggcaata 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29501 ccatcttccttcgtagaacacaacacatatagacccataccaatcaatttaatggcaata 29442
Query: 419 ccggtaacttggaatattttgtaacggcggaaaactctaaacaacgcaccccagaaaaca 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29441 ccggtaacttggaatattttgtaacggcggaaaactctaaacaacgcaccccagaaaaca 29382
Query: 479 ccaaagaaacacaaacccatcgtggtcgtgttggacaaataagtctagtcttggatagac 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29381 ccaaagaaacacaaacccatcgtggtcgtgttggacaaataagtctagtcttggatagac 29322
Query: 539 aagtttaatacaacactagtatacgaggtgaagtacaatagagagaagtaaccacccatt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29321 aagtttaatacaacactagtatacgaggtgaagtacaatagagagaagtaaccacccatt 29262
Query: 599 tggtagatgaaatcaattatgacacagcaaatgaatgttctgttagttaagactctcttt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29261 tggtagatgaaatcaattatgacacagcaaatgaatgttctgttagttaagactctcttt 29202
Query: 659 ggtagcaatgggaatggggcaaaccagatttcataaaccgcgtaacaaatcagcaaaata 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29201 ggtagcaatgggaatggggcaaaccagatttcataaaccgcgtaacaaatcagcaaaata 29142
Query: 719 ccaccaactacctccattgctatcatacttgggttattccaacccccaacagcatatgag 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29141 ccaccaactacctccattgctatcatacttgggttattccaacccccaacagcatatgag 29082
Query: 779 tttwaagagcatgggatcaacatcaaagaaaagg 812
| | |||||||||| |||||||||||||||||||
Sbjct: 29081 tataaagagcatggaatcaacatcaaagaaaagg 29048
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4929
Number of Sequences: 1807
Number of extensions: 4929
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 812
length of database: 10,358,551
effective HSP length: 16
effective length of query: 796
effective length of database: 10,329,639
effective search space: 8222392644
effective search space used: 8222392644
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)